ValExp_example_fit

Draws from an MCMC algorithm fit to simulated data. This object exists solely for easing examples in documentation of mcmc_sum.

Format

A list of length 3 matrices with columns and rows as described here.

Source

Simulated data using simulate_validatedData, then isolated one dataset and the corresponding zeros. Draws were obtained from model fitting using the code inside tune_mcmc.

Details

• Columns: Parameters (lambda, psi, and theta for a two species assemblage)

• Rows; Iterations of the MCMC. There are 1000 post-warmup draws for each.

Examples

str(ValExp_example_fit)
#> List of 3
#>  $ : num [1:1000, 1:8] 9.92 9.84 9.84 9.84 10.07 ...
#>   ..- attr(*, "dimnames")=List of 2
#>   .. ..$ : NULL
#>   .. ..$ : chr [1:8] "lambda[1]" "lambda[2]" "psi[1]" "psi[2]" ...
#>  $ : num [1:1000, 1:8] 10.9 10.9 10.3 10.3 10.3 ...
#>   ..- attr(*, "dimnames")=List of 2
#>   .. ..$ : NULL
#>   .. ..$ : chr [1:8] "lambda[1]" "lambda[2]" "psi[1]" "psi[2]" ...
#>  $ : num [1:1000, 1:8] 11.1 11.1 11 10.8 10.8 ...
#>   ..- attr(*, "dimnames")=List of 2
#>   .. ..$ : NULL
#>   .. ..$ : chr [1:8] "lambda[1]" "lambda[2]" "psi[1]" "psi[2]" ...